原著論文

2019

F. Rahayu, T. Tajima, J. Kato, S. Kato, Y. Nakashimada: Ethanol yield and sugar usability in thermophilic ethanol production from lignocellulose hydrolysate by genetically engineered Moorella thermoacetica, Journal of Bioscience and Bioengineering, inpress, doi:10.1016/j.jbiosc.2019.08.008

A. Hida, T. Tajima, J. Kato: Two citrate chemoreceptors involved in chemotaxis to citrate and/or citrate-metal complexes in Ralstonia pseudosolanacearum, Journal of Bioscience and Bioengineering, 127, (2), 169-175 (2019) doi:10.1016/j.jbiosc.2018.07.014

G. Mahipant, J. Kato, N. Kataoka, AS. Vangnai: An alternative genome-integrated method for undomesticated Bacillus subtilis and related species, J Gen Appl Microbiol, 65(2), 96-105 (2019) doi:10.2323/jgam.2018.06.001

2018

RR. Navarro, Y. Otsuka, M. Nojiri, S. Ishizuka, M. Nakamura, K. Shikinaka, K. Matsuo, K. Sasaki, K. Sasaki, K. Kimbara, Y. Nakashimada, J. Kato: Simultaneous enzymatic saccharification and comminution for the valorization of lignocellulosic biomass toward natural products, BMC Biotechnol, 18(1), 79 (2018) doi:10.1186/s12896-018-0487-1

A. Corral-Lugo, M. Matilla, D. Martín-Mora, H. Silva Jiménez, N. M. Torres, J. Kato, A. Hida, S. Oku, M. Conejero-Muriel, J. A. Gavira, T. Krell: High-affinity chemotaxis to histamine mediated by the TlpQ chemoreceptor of the human pathogen Pseudomonas aeruginosa, MBio, 9(6), e01894-18 (2018) doi:10.1128/mBio.01894-18

K. Watanabe, K. H. V. Arafiles, R. Higashi, Y. Okamura, T. Tajima, Y. Matsumura, Y. Nakashimada, K. Matsuyama, T. Aki: Isolation of Aurantiochytrium sp. mutants highly producing carotenoids and improvement of astaxanthin productivity using metabolic information, Journal of Oleo Science, 67(5), 571-578 (2018) doi:10.5650/jos.ess17230

T. Tajima, K. Tomita, H. Miyahara, K. Watanabe, T. Aki, Y. Okamura, Y. Matsumura, Y. Nakashimada, J. Kato: Efficient conversion of mannitol derived from brown seaweed to fructose for fermentation with a thraustochytrid, Journal of Bioscience and Bioengineering, 125(2), 180-184 (2018) doi:10.1016/j.jbiosc.2017.09.002

2017

S. Oku, A. Hida, M. Tunchai, T. Tajima, Nakashimada, J. Kato: Involvement of many chemotaxis sensors in negative chemotaxis to ethanol in Ralstonia pseudosolanacearum Ps29, Microbiology, 163(12), 1880-1889 (2017) doi:10.1099/mic.0.000574

P. Duangkaew, S. Inoue, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: Quantitative in situ MS analysis of mannitol decomposition products under hydrothermal conditions, Energy & Fuels, 31(10), 10866-10873 (2017) doi:10.1021/acs.energyfuels.7b01558

T. Miura, A. Kita, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, Y. Nakashimada: Improved methanization and microbial diversity during batch mode cultivation with repetition of substrate addition using defined organic matter and marine sediment inoculum at seawater salinity, Bioresource Technology, 245(Pt A), 833-840 (2017) doi:10.1016/j.biortech.2017.09.009

A. Hida, S. Oku, Y. Nakashimada, T. Tajima, J. Kato: Identification of boric acid as a novel chemoattractant and elucidation of its chemoreceptor in Ralstonia pseudosolanacearum Ps29, Scientific Reports, 7(1), 8609 (2017) doi:10.1038/s41598-017-09176-3

M. Tunchai, A. Hida, S. Oku, Y. Nakashimada, T. Nikata, T. Tajima, J. Kato: Negative chemotaxis of Ralstonia pseudosolanacearum to maleate and identification of the maleate chemosensory protein, Journal of Bioscience and Bioengineering, 124(6), 647-652 (2017) doi:10.1016/j.jbiosc.2017.07.002

F. Rahayu, Y. Kawai, Y. Iwasaki, K. Yoshida, A. Kita, T. Tajima, J. Kato, K. Murakami, T. Hoshino, Y. Nakashimada:Thermophilic ethanol fermentation from lignocellulose hydrolysate by genetically engineered Moorella thermoacetica, Bioresource Technology, 245(Pt B), 1393-1399 (2017) doi:10.1016/j.biortech.2017.05.146

Y. Iwasaki, A. Kita, K. Yoshida, T. Tajima, S. Yano, T. Shou, M. Saito, J. Kato, K. Murakami, Y. Nakashimada: Homolactic acid fermentation by the genetically engineered thermophilic homoacetogen Moorella thermoacetica ATCC39073, Applied and Environmental Microbiology, 83(8), pii: e00247-17 (2017) doi:10.1128/AEM.00247-17

M. Tunchai, A. Hida, S. Oku, Y. Nakashimada, T. Tajima, J. Kato: Identification and characterization of chemosensors for d-malate, unnatural enantiomer of malate, in Ralstonia pseudosolanacearum, Microbiology, 163(2), 233-242 (2017) doi:10.1099/mic.0.000408

P. Duangkaew, S. Inoue, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: Real-Time Mass Spectrometric Analysis of Hydrothermal Reaction Products, Industrial & Engineering Chemistry Research, 56(36), 9993-9998 (2017) doi:10.1021/acs.iecr.7b02663

P. Duangkaew, S. Inoue, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: In situ mass spectrometry of glucose decomposition under hydrothermal reactions, Korean J. Chem. Eng., 34(3), 1-7 (2017) doi:10.1007/s11814-017-0030-4

P. Duangkaew, S. Inoue, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: In-situ mass spectroscopic analysis of glucose decomposition under hydrothermal condition: Quantitative analysis for reaction kinetics, Journal of the Japan Petroleum Institute, 60(2), 101-109 (2017) doi:10.1627/jpi.60.101

R. Mohamad, T. Aki, Y. Nakashimada, Y. Okamura, T.Tajima, Y. Matsumura: Decomposition kinetics of uronic acids obtained from kelp under hydrothermal condition, Journal of the Energy Institute, 90(2), 185-190 (2017) doi:10.1016/j.joei.2016.02.005

G. Mahipant, A.Paemanee, S. Roytrakul, J. Kato, AS. Vangnai: The significance of proline and glutamate on butanol chaotropic stress in Bacillus subtilis 168, Biotechnol Biofuels, 10, 122 (2017) doi: 10.1186/s13068-017-0811-3

2016

R. Mohamad, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: Kinetics of sorbitol decomposition under hydrothermal condition, Journal of Japan Petroleum Institute, 59(4), 149-154 (2016) doi:10.1627/jpi.59.149

A. Kita, K. Kobayashi, T. Miura, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, N. Nishio, Y. Nakashimada: High-rate fermentation of acetate to methane under high salinity by acetoclastic methanogens immobilized in marine sediment, Journal of the Japan Petroleum Institute, 56(1), 9-15 (2016) doi:10.1627/jpi.59.9

A. Kita, T. Miura, S Kawata, T. Yamaguchi, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, N. Nishio, Y. Nakashimada: Bacterial community structure and predicted alginate metabolic pathway in an alginate-degrading bacterial consortium, Journal of Bioscience and Bioengineering, 121(3), 286-292 (2016) doi:10.1016/j.jbiosc.2015.06.014

A. Kita, K. Suehira, T. Miura, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, N. Nishio, Y. Nakashimada: Characterization of a halotolerant acetoclastic methanogen highly enriched from marine sediment and its application in removal of acetate, Journal of Bioscience and Bioengineering, 121(2), 196-202 (2016) doi:10.1016/j.jbiosc.2015.05.018

Y. Okamura, S. Nakai, M Ohkawachi, M. Suemitsu, H. Takahashi, T. Aki, Y. Matsumura, T. Tajima, Y. Nakashimada, M. Matsumoto: Isolation and characterization of a lipid-producing bacterium from short-chain fatty acids, Bioresource Technology, 201, 215-221 (2016) doi:10.1016/j.biortech.2015.11.040

T. Miura, A. Kita, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, Y. Nakashimada: Semi-continuous methane production from undiluted brown algae using a halophilic marine microbial community, Bioresource Technology, 200, 616-623 (2016) doi:10.1016/j.biortech.2015.10.090

R. Mohamad, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: Decomposition kinetics of mannose, its sugar alcohol, and its uronic acid under hydrothermal condition, Journal of Chemical Engineering of Japan, 49(7), 663-667 (2016) doi:10.1252/jcej.15we164

2015

T. Miura, A. Kita, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, Y. Nakashimada : Effect of salinity on methanogenic propionate degradation by acclimated marine sediment-derived culture, Applied Biochemistry and Biotechnology, 177(7), 1541-1552 (2015) doi:10.1007/s12010-015-1834-5

R. Matsumoto, T. Aki, Y. Nakashimada, Y. Okamura, T. Tajima, Y. Matsumura: Determination of Mannitol Decomposition Rate under Hydrothermal Pretreatment Condition, Journal of the Japan Petroleum Institute, 58, 252-255, (2015) doi:10.1627/jpi.58.252

A. Hida, S. Oku, T. Kawasaki, Y. Nakashimada, T. Tajima, J. Kato: Identification of the mcpA and mcpM genes encoding methyl-accepting chemotaxis proteins (MCPs) for amino acids and L-malate and involvement of McpM-mediated chemotaxis in plant infection by Ralstonia pseudosolanacearum (Ralstonia solanacearum), Applied and Environmental Microbiology, 81(21), 7420-7430 (2015) doi:10.1128/AEM.01870-15

T. Tajima, M. Hamada, Y. Nakashimada, J. Kato: Efficient aspartic acid production by a psychrophile-based simple biocatalyst, Journal of Industrial Microbiology & Biotechnology, 42(10) 1319-1324, (2015) doi:10.1007/s10295-015-1669-7

A. Kita, T. Miura, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, Y. Nakashimada: Dysgonomonas alginatilytica sp. nov., a novel alginate-degrading bacterium isolated from microbial consortium, International Journal of Systematic and Evolutionary Microbiology, 65(10), 3570-3575, (2015) doi:10.1099/ijsem.0.000459

N. Kataoka, AS. Vangnai, T. Pongtharangkul, T Tajima, T. Yakushi, K. Matsushita, J. Kato: Construction of CoA-dependent 1-butanol synthetic pathway functions under aerobic conditions in Escherichia coli, Journal of Biotechnology, 204, 25-32 (2015) doi:10.1016/j.jbiotec.2015.03.027

T. Miura, A. Kita, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, Y. Nakashimada: Improved methane production from brown algae under high salinity by fed-batch acclimation, Bioresource Technology, 187, 275-281 (2015) doi:10.1016/j.biortech.2015.03.142

Sampedro I, Kato J, Hill JE: Elastin degradation product isodesmosine is a chemoattractant for Pseudomonas aeruginosa. Microbiology, 161(7), 1496-1503 (2015) doi:10.1099/mic.0.000090

T. Jojima, R. Noburyu, M. Sasaki, T. Tajima, M. Suda, H. Yukawa, M. Inui: Metabolic engineering for improved production of ethanol by Corynebacterium glutamicum. Applied Microbiology and Biotechnology 99(3), 1165-1172 (2015) doi:10.1007/s00253-014-6223-4

2014

S. Oku, A. Komatsu, Y. Nakashimada, T. Tajima, J. Kato: Identification of Pseudomonas fluorescens chemotaxis sensory proteins for malate, succinate, and fumarate, and their involvement in root colonization, Microbes and Environments, 29(4), 413-419 (2014) doi: 10.1264/jsme2.ME14128

A. Kongpol, J. Kato, T. Tajima, T. Pongtharangkul, AS. Vangnai: Enhanced 3-methylcatechol production by Pseudomonas putida TODE1 in a two-phase biotransformation system, The Journal of General and Applied Microbiology 60 (4), 183-190 (2014) doi:10.2323/jgam.60.183

KH. Arafiles, H. Iwasaka, Y. Eramoto, Y. Okamura, T. Tajima, Y. Matsumura , Y. Nakashimada, T. Aki: Value-added lipid production from brown seaweed biomass by two-stage fermentation using acetic acid bacterium and thraustochytrid. Applied Microbiology and Biotechnology, 98 (22), 9207-9216 (2014) doi:10.1007/s00253-014-5980-4

T. Miura, A. Kita, Y. Okamura, T. Aki, Y. Matsumura, T. Tajima, J. Kato, Y. Nakashimada: Evaluation of marine sediments as microbial sources for methane production from brown algae under high salinity. Bioresource Technology, 169, 362-366 (2014) doi:10.1016/j.biortech.2014.07.013

N. Kataoka, AS. Vangnai, H. Ueda, T. Tajima, Y. Nakashimada, J. Kato: Enhancement of (R)-1,3-butanediol production by engineered Escherichia coli using a bioreactor system with strict regulation of overall oxygen transfer coefficient and pH, Bioscience, Biotechnology, and Biochemistry, 78(4), 695-700 (2014) doi:10.1080/09168451.2014.891933

T. Nitisakulkan, S. Oku, D. Kudo, Y. Nakashimada, T. Tajima, AS. Vangnai, J. Kato: Degradation of chloroanilines by toluene dioxygenase from Pseudomonas putida T57, Journal of Bioscience and Bioengineering, 117(3), 292-297 (2014) doi:10.1016/j.jbiosc.2013.08.012

R. Matsumoto, T. Aki, Y. Okamura, T. Tajima, Y. Nakashimada, Y. Matsumura: Behavior of organics in kelp during hydrothermal pretreatment: Fundamental characteristics and effect of salt, J. Jpn. Inst. Energy, 93(5), 531-535 (2014) doi:10.3775/jie.93.531

2013

T. Tajima, K. Fuki, N. Kataoka, D. Kudou, Y. Nakashimada, J. Kato: Construction of a simple biocatalyst using psychrophilic bacterial cells and its application for efficient 3-hydroxypropionaldehyde production from glycerol, AMB Express, 3(1), 69 (2013) doi:10.1186/2191-0855-3-69

AS. Vangnai, K. Takeuchi, S. Oku, N. Kataoka, T. Nitisakulkan, T. Tajima, J. Kato: Identification of CtpL as a chromosomally-encoded chemoreceptor for 4-chloroaniline and catechol in Pseudomonas aeruginosa PAO1, Applied and Environmental Microbiology, 79(23), 7241-7248 (2013) doi:10.1128/AEM.02428-13

Y. Iwasaki, A. Kita, S. Sakai, K. Takaoka, S. Yano, T. Tajima, J. Kato, N. Nishio, K. Murakami, Y. Nakashimada: Engineering of a functional thermostable kanamycin resistance marker for use in Moorella thermoacetica ATCC39073, FEMS Microbiology Letters, 343(1), 8-12 (2013) doi:10.1111/1574-6968.12113

N. Kataoka, AS. Vangnai, T. Tajima, Y. Nakashimada, J. Kato: Improvement of (R)-1,3-butanediol production by engineered Escherichia coli, Journal of Bioscience and Bioengineering, 115(5), 475-480 (2013) doi:10.1016/j.jbiosc.2012.11.025

A. Kita, Y. Iwasaki, S. Sakai, S. Okuto, K. Takaoka, T. Suzuki, S. Yano, S. Sawayama, T. Tajima, J. Kato, N. Nishio, K. Murakami, Y. Nakashimada: Development of genetic transformation and heterologous expression system in carboxydotrophic thermophilic acetogen Moorella thermoacetica, Journal of Bioscience and Bioengineering, 115(4), 347-352 (2013) doi:10.1016/j.jbiosc.2012.10.013

2012

S. Oku, A. Komatsu, T. Tajima, Y. Nakashimada, J. Kato: Identification of chemotaxis sensory proteins for amino acids in Pseudomonas fluorescens Pf0-1 and their involvement in chemotaxis to tomato root exudate and root colonization, Microbes and Environments, 27(4), 462-469 (2012) doi:10.1264/jsme2.ME12005

T. Tajima, N. Hayashida, R. Matsumura, A. Omura, Y. Nakashimada, J. Kato: Isolation and characterization of tetrahydrofuran-degrading Rhodococcus aetherivorans strain M8, Process Biochemistry, 47(11), 1665-1669 (2012) doi:10.1016/j.procbio.2011.08.009

AS. Vangnai, N. Kataoka, S. Soonglerdsongpha, C. Kalambaheti, T. Tajima, J. Kato: Construction and application of an Escherichia coli bioreporter for aniline and chloroaniline detection, Journal of Industrial Microbiology & Biotechnology, 39(12), 1801-1810 (2012) doi:10.1007/s10295-012-1180-3

K. Honda, M. Imura, K. Okano, T. Omasa, J. Kato, H. Ohtake: Identification of the replication region of a 111-kb circular plasmid from Rhodococcus opacus B-4 by λ red recombination-based deletion analysis, Bioscience, Biotechnology, and Biochemistry, 76(9), 1758-1764 (2012) doi:10.1271/bbb.120362

N. Wangrangsimagul, K. Klinsakul, A. S. Vangnai, J. Wongkongkatep, P. Inprakhon, K. Honda, H. Ohtake, J. Kato, T. Pongtharangkul: Bioproduction of vanillin using an organic solvent-tolerant Brevibacillus agri 13, Applied Microbiology and Biotechnology, 93(2), 555-563 (2012) doi:10.1007/s00253-011-3510-1

A. Siriphongphaew, P. Pisnupong, J. Wongkongkatep, P. Inprakhon, A. S. Vangnai, K. Honda, H. Ohtake, J. Kato, J. Ogawa, S. Shimizu, V. B. Urlacher, R. D. Schmid, T. Pongtharangkul: Development of a whole-cell biocatalyst co-expressing P450 monooxygenase and glucose dehydrogenase for synthesis of epoxyhexane, Applied Microbiology and Biotechnology, 95(2), 357-367 (2012) doi:10.1007/s00253-012-4039-7

A. Kongpol, J. Kato, T. Tajima, AS. Vangnai: Characterization of acetonitrile-tolerant marine bacterium Exiguobacterium sp SBH81 and its tolerance mechanism, Microbes and Environments, 27(1), 30-35 (2012) doi:10.1264/jsme2.ME11228

2011

N. Kataoka, T. Tajima, J. Kato, W. Rachadech, AS. Vangnai: Development of butanol-tolerant Bacillus subtilis strain GRSW2-B1 as a potential bioproduction host, AMB Express, 1(1), 10 (2011). doi:10.1186/2191-0855-1-10

S. Sakai, Y. Takaki, S. Shimamura, M. Sekine, T. Tajima, H. Kosugi, N. Ichikawa, E. Tasumi, A. T. Hiraki, A. Shimizu, Y. Kato, R. Nishiko, K. Mori, N. Fujita, H. Imachi, K. Takai: Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella paludicola, the first cultivated representative of the order Methanocellales, ProS One, 6(7), e22898 (2011) 10.1371/journal.pone.0022898

S. Oku, H. Kinoshita, T. Tajima, J. Kato: Identification and characterization of methyl-accepting chemotaxis proteins for trichloroethylene in Pseudomonas putida F1. Journal of Environmental Biotechnology, 11(1-2), 83-87 (2011)

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